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AnalyzAIRR is an R package developed to analyze bulk Ig/TCR repertoire datasets.

  • It proposes an analytical routine starting with data exploration, leading to in-depth statistical comparisons with the aim of answering defined biological questions.
  • It allows the calculation of a set of diversity measures and statistical metrics applicable at any level of granularity.
  • It offers different types of data visualization and ready-to-publish graphics that can be easily personalized.




Shiny interface

A Shiny web application was developed for AnalyzAIRR making it user-friendly for biologists with little or no background in bioinformatics. The application can be downloaded from this Github repository.

Support

For any questions regarding the installation of AnalyzAIRR, bug reports or feature requests, please submit an issue.